Install Mendeley Reference Manager was not successfull  [Solved]

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Author
mega
Posts: 56
Joined: Wed May 01, 2019 12:11 am

Install Mendeley Reference Manager was not successfull

#1 Post by mega »

Hello,
I try to install mendeley reference manager. I try follow the instruction in https://askubuntu.com/questions/1426894 ... -ubuntu-22.
The command like this :

Code: Select all

# ./mendeley-reference-manager-2.109.0-x86_64.AppImage
The result is :

Code: Select all

[0203/173447.043555:FATAL:electron_main_delegate.cc(299)] Running as root without --no-sandbox is not supported. See https://crbug.com/638180.
Trace/breakpoint trap
Then I type the command :

Code: Select all

# ./mendeley-reference-manager-2.109.0-x86_64.AppImage --no-sandbox
The result is :

Code: Select all

12091:0203/173508.077995:ERROR:bus.cc(399)] Failed to connect to the bus: Could not parse server address: Unknown address type (examples of valid types are "tcp" and on UNIX "unix")
[12091:0203/173508.078127:ERROR:bus.cc(399)] Failed to connect to the bus: Could not parse server address: Unknown address type (examples of valid types are "tcp" and on UNIX "unix")
Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

[12139:0203/173508.326199:ERROR:angle_platform_impl.cc(43)] Display.cpp:1004 (initialize): ANGLE Display::initialize error 12289: Could not open the default X display.
ERR: Display.cpp:1004 (initialize): ANGLE Display::initialize error 12289: Could not open the default X display.
[12139:0203/173508.326547:ERROR:gl_display.cc(508)] EGL Driver message (Critical) eglInitialize: Could not open the default X display.
[12139:0203/173508.326718:ERROR:gl_display.cc(920)] eglInitialize OpenGL failed with error EGL_NOT_INITIALIZED, trying next display type
Authorization required, but no authorization protocol specified

[12139:0203/173508.331122:ERROR:angle_platform_impl.cc(43)] Display.cpp:1004 (initialize): ANGLE Display::initialize error 12289: Could not open the default X display.
ERR: Display.cpp:1004 (initialize): ANGLE Display::initialize error 12289: Could not open the default X display.
[12139:0203/173508.331365:ERROR:gl_display.cc(508)] EGL Driver message (Critical) eglInitialize: Could not open the default X display.
[12139:0203/173508.331457:ERROR:gl_display.cc(920)] eglInitialize OpenGLES failed with error EGL_NOT_INITIALIZED
[12139:0203/173508.331548:ERROR:gl_ozone_egl.cc(23)] GLDisplayEGL::Initialize failed.
[12139:0203/173508.404951:ERROR:viz_main_impl.cc(186)] Exiting GPU process due to errors during initialization
[12091:0203/173508.647725:ERROR:bus.cc(399)] Failed to connect to the bus: Could not parse server address: Unknown address type (examples of valid types are "tcp" and on UNIX "unix")
[12091:0203/173508.721190:ERROR:bus.cc(399)] Failed to connect to the bus: Could not parse server address: Unknown address type (examples of valid types are "tcp" and on UNIX "unix")
17:35:08.748 › Creating directory /root/.config/Mendeley Reference Manager/userfiles
17:35:08.772 › Creating directory /root/.config/Mendeley Reference Manager/usersettings
(node:12091) ProtocolDeprecateCallback: The callback argument of protocol module APIs is no longer needed.
(Use `mendeley-reference-manager --trace-warnings ...` to show where the warning was created)
(node:12091) ProtocolDeprecateCallback: The callback argument of protocol module APIs is no longer needed.
Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

[12158:0203/173508.896990:ERROR:angle_platform_impl.cc(43)] Display.cpp:1004 (initialize): ANGLE Display::initialize error 12289: Could not open the default X display.
ERR: Display.cpp:1004 (initialize): ANGLE Display::initialize error 12289: Could not open the default X display.
[12158:0203/173508.898412:ERROR:gl_display.cc(508)] EGL Driver message (Critical) eglInitialize: Could not open the default X display.
[12158:0203/173508.898764:ERROR:gl_display.cc(920)] eglInitialize OpenGL failed with error EGL_NOT_INITIALIZED, trying next display type
Authorization required, but no authorization protocol specified

[12158:0203/173508.900138:ERROR:angle_platform_impl.cc(43)] Display.cpp:1004 (initialize): ANGLE Display::initialize error 12289: Could not open the default X display.
ERR: Display.cpp:1004 (initialize): ANGLE Display::initialize error 12289: Could not open the default X display.
[12158:0203/173508.902194:ERROR:gl_display.cc(508)] EGL Driver message (Critical) eglInitialize: Could not open the default X display.
[12158:0203/173508.906602:ERROR:gl_display.cc(920)] eglInitialize OpenGLES failed with error EGL_NOT_INITIALIZED
[12158:0203/173508.906969:ERROR:gl_ozone_egl.cc(23)] GLDisplayEGL::Initialize failed.
[12158:0203/173508.912579:ERROR:viz_main_impl.cc(186)] Exiting GPU process due to errors during initialization
Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

[12169:0203/173509.054462:ERROR:angle_platform_impl.cc(43)] Display.cpp:1004 (initialize): ANGLE Display::initialize error 12289: Could not open the default X display.
ERR: Display.cpp:1004 (initialize): ANGLE Display::initialize error 12289: Could not open the default X display.
[12169:0203/173509.054740:ERROR:gl_display.cc(508)] EGL Driver message (Critical) eglInitialize: Could not open the default X display.
[12169:0203/173509.054907:ERROR:gl_display.cc(920)] eglInitialize OpenGL failed with error EGL_NOT_INITIALIZED, trying next display type
Authorization required, but no authorization protocol specified

[12169:0203/173509.055431:ERROR:angle_platform_impl.cc(43)] Display.cpp:1004 (initialize): ANGLE Display::initialize error 12289: Could not open the default X display.
ERR: Display.cpp:1004 (initialize): ANGLE Display::initialize error 12289: Could not open the default X display.
[12169:0203/173509.055568:ERROR:gl_display.cc(508)] EGL Driver message (Critical) eglInitialize: Could not open the default X display.
[12169:0203/173509.055704:ERROR:gl_display.cc(920)] eglInitialize OpenGLES failed with error EGL_NOT_INITIALIZED
[12169:0203/173509.055798:ERROR:gl_ozone_egl.cc(23)] GLDisplayEGL::Initialize failed.
[12169:0203/173509.069507:ERROR:viz_main_impl.cc(186)] Exiting GPU process due to errors during initialization
Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

[12184:0203/173509.177177:ERROR:angle_platform_impl.cc(43)] DisplayVkXcb.cpp:59 (initialize): xcb_connect() failed, error 1
ERR: DisplayVkXcb.cpp:59 (initialize): xcb_connect() failed, error 1
[12184:0203/173509.177385:ERROR:angle_platform_impl.cc(43)] Display.cpp:1004 (initialize): ANGLE Display::initialize error 12289: Not initialized.
ERR: Display.cpp:1004 (initialize): ANGLE Display::initialize error 12289: Not initialized.
[12184:0203/173509.177490:ERROR:gl_display.cc(508)] EGL Driver message (Critical) eglInitialize: Not initialized.
[12184:0203/173509.177581:ERROR:gl_display.cc(920)] eglInitialize SwANGLE failed with error EGL_NOT_INITIALIZED
[12184:0203/173509.177694:ERROR:gl_ozone_egl.cc(23)] GLDisplayEGL::Initialize failed.
[12184:0203/173509.184926:ERROR:viz_main_impl.cc(186)] Exiting GPU process due to errors during initialization
Authorization required, but no authorization protocol specified

Authorization required, but no authorization protocol specified

[12192:0203/173509.237523:ERROR:gpu_init.cc(523)] Passthrough is not supported, GL is disabled, ANGLE is 
[12192:0203/173509.274715:ERROR:x11_software_bitmap_presenter.cc(142)] XGetWindowAttributes failed for window 79691779
17:35:47.016 › Unhandled Exception TypeError: Object has been destroyed
    at /tmp/.mount_mendeldWVSDg/resources/app.asar/dist/main.js:2:684785
    at Timeout._onTimeout (/tmp/.mount_mendeldWVSDg/resources/app.asar/dist/main.js:2:684814)
    at listOnTimeout (node:internal/timers:559:17)
    at process.processTimers (node:internal/timers:502:7)
So, how to solve this ?
Last edited by mega on Sat Feb 03, 2024 5:33 pm, edited 1 time in total.

User avatar
j2mcgreg
Global Moderator
Posts: 7305
Joined: Tue Oct 23, 2007 12:04 pm

Re: Install Mendeley Reference Manager was not successfull

#2 Post by j2mcgreg »

Where did you get it? I just tried and failed (several times) to download the package from the Mendeley site.
HP 15; ryzen 3 5300U APU; 500 Gb SSD; 8GB ram
HP 17; ryzen 3 3200; 500 GB SSD; 12 GB ram
Idea Center 3; 12 gen i5; 256 GB ssd;

In Linux, newer isn't always better. The best solution is the one that works.

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Eadwine Rose
Administrator
Posts: 15400
Joined: Wed Jul 12, 2006 2:10 am

Re: Install Mendeley Reference Manager was not successfull

#3 Post by Eadwine Rose »

Please post code output in code tags, for better readability. The </> button when you edit, select the text and click that button.
MX-23.6_x64 July 31 2023 * 6.1.0-40amd64 ext4 Xfce 4.20.0 * 8-core AMD Ryzen 7 2700
Asus TUF B450-Plus Gaming UEFI * Asus GTX 1050 Ti Nvidia 535.247.01 * 2x16Gb DDR4 2666 Kingston HyperX Predator
Samsung 870EVO * Samsung S24D330 & P2250 * HP Envy 5030

mega
Posts: 56
Joined: Wed May 01, 2019 12:11 am

Re: Install Mendeley Reference Manager was not successfull

#4 Post by mega »

Hello j2mcgreg,
I download in https://www.mendeley.com/download-refer ... ager/linux
Sometimes fails to download. Probably the website system.

User avatar
j2mcgreg
Global Moderator
Posts: 7305
Joined: Tue Oct 23, 2007 12:04 pm

Re: Install Mendeley Reference Manager was not successfull

#5 Post by j2mcgreg »

mega wrote: Sat Feb 03, 2024 5:36 pm Hello j2mcgreg,
I download in https://www.mendeley.com/download-refer ... ager/linux
Sometimes fails to download. Probably the website system.
I just tried again and the download link is not working. However in order to help you solve your problem we need your Quick System Info.
HP 15; ryzen 3 5300U APU; 500 Gb SSD; 8GB ram
HP 17; ryzen 3 3200; 500 GB SSD; 12 GB ram
Idea Center 3; 12 gen i5; 256 GB ssd;

In Linux, newer isn't always better. The best solution is the one that works.

mega
Posts: 56
Joined: Wed May 01, 2019 12:11 am

Re: Install Mendeley Reference Manager was not successfull

#6 Post by mega »

Or you can download in my drive :
https://drive.google.com/drive/folders/ ... sp=sharing

My system :

Code: Select all

System:
  Kernel: 6.1.0-17-amd64 [6.1.69-1] arch: x86_64 bits: 64 compiler: gcc v: 12.2.0
    parameters: BOOT_IMAGE=/boot/vmlinuz-6.1.0-17-amd64 root=UUID=<filter> ro quiet splash
  Desktop: Xfce v: 4.18.1 tk: Gtk v: 3.24.36 info: xfce4-panel wm: xfwm v: 4.18.0 vt: 7
    dm: LightDM v: 1.26.0 Distro: MX-23.2_x64 Libretto July 31  2023 base: Debian GNU/Linux 12
    (bookworm)
Machine:
  Type: Laptop System: ASUSTeK product: VivoBook 12_ASUS Laptop E203MAH_E203MAH v: 1.0
    serial: <superuser required>
  Mobo: ASUSTeK model: E203MAH v: 1.0 serial: <superuser required> UEFI: American Megatrends
    v: E203MAH.302 date: 06/26/2018
Battery:
  ID-1: BAT0 charge: 30.9 Wh (89.0%) condition: 34.7/42.1 Wh (82.4%) volts: 11.5 min: 11.5
    model: ASUSTeK ASUS Battery type: Li-ion serial: N/A status: discharging
CPU:
  Info: model: Intel Celeron N4000 bits: 64 type: MCP arch: Goldmont Plus level: v2 built: 2017
    process: Intel 14nm family: 6 model-id: 0x7A (122) stepping: 1 microcode: 0x3E
  Topology: cpus: 1x cores: 2 smt: <unsupported> cache: L1: 112 KiB desc: d-2x24 KiB; i-2x32 KiB
    L2: 4 MiB desc: 1x4 MiB
  Speed (MHz): avg: 1512 high: 1530 min/max: 800/2600 scaling: driver: intel_cpufreq
    governor: ondemand cores: 1: 1495 2: 1530 bogomips: 4377
  Flags: ht lm nx pae sse sse2 sse3 sse4_1 sse4_2 ssse3 vmx
  Vulnerabilities:
  Type: gather_data_sampling status: Not affected
  Type: itlb_multihit status: Not affected
  Type: l1tf status: Not affected
  Type: mds status: Not affected
  Type: meltdown mitigation: PTI
  Type: mmio_stale_data status: Not affected
  Type: retbleed status: Not affected
  Type: spec_rstack_overflow status: Not affected
  Type: spec_store_bypass mitigation: Speculative Store Bypass disabled via prctl
  Type: spectre_v1 mitigation: usercopy/swapgs barriers and __user pointer sanitization
  Type: spectre_v2 mitigation: Enhanced IBRS, IBPB: conditional, RSB filling, PBRSB-eIBRS: Not
    affected
  Type: srbds status: Not affected
  Type: tsx_async_abort status: Not affected
Graphics:
  Device-1: Intel GeminiLake [UHD Graphics 600] vendor: ASUSTeK driver: i915 v: kernel arch: Gen-9
    process: Intel 14n built: 2015-16 ports: active: eDP-1 empty: DP-1,HDMI-A-1 bus-ID: 00:02.0
    chip-ID: 8086:3185 class-ID: 0300
  Device-2: IMC Networks USB2.0 VGA UVC WebCam type: USB driver: uvcvideo bus-ID: 1-5:3
    chip-ID: 13d3:5a06 class-ID: 0e02
  Display: x11 server: X.Org v: 1.21.1.7 compositor: xfwm v: 4.18.0 driver: X:
    loaded: modesetting unloaded: fbdev,vesa dri: iris gpu: i915 display-ID: :0.0 screens: 1
  Screen-1: 0 s-res: 1366x768 s-dpi: 96 s-size: 361x203mm (14.21x7.99") s-diag: 414mm (16.31")
  Monitor-1: eDP-1 model: AU Optronics 0x225c built: 2014 res: 1366x768 hz: 60 dpi: 136
    gamma: 1.2 size: 256x144mm (10.08x5.67") diag: 294mm (11.6") ratio: 16:9 modes: 1366x768
  API: OpenGL v: 4.6 Mesa 22.3.6 renderer: Mesa Intel UHD Graphics 600 (GLK 2) direct-render: Yes
Audio:
  Device-1: Intel Celeron/Pentium Silver Processor High Definition Audio vendor: ASUSTeK
    driver: snd_hda_intel v: kernel alternate: snd_soc_skl,snd_sof_pci_intel_apl bus-ID: 00:0e.0
    chip-ID: 8086:3198 class-ID: 0403
  API: ALSA v: k6.1.0-17-amd64 status: kernel-api tools: alsamixer,amixer
  Server-1: PipeWire v: 1.0.0 status: active with: 1: pipewire-pulse status: active
    2: wireplumber status: active 3: pipewire-alsa type: plugin 4: pw-jack type: plugin
    tools: pactl,pw-cat,pw-cli,wpctl
Network:
  Device-1: Intel Gemini Lake PCH CNVi WiFi driver: iwlwifi v: kernel modules: wl bus-ID: 00:0c.0
    chip-ID: 8086:31dc class-ID: 0280
  IF: wlan0 state: up mac: <filter>
  IF-ID-1: docker0 state: down mac: <filter>
Bluetooth:
  Device-1: Intel Bluetooth 9460/9560 Jefferson Peak (JfP) type: USB driver: btusb v: 0.8
    bus-ID: 1-9:4 chip-ID: 8087:0aaa class-ID: e001
  Report: hciconfig ID: hci0 rfk-id: 1 state: up address: <filter> bt-v: 3.0 lmp-v: 5.1
    sub-v: 100 hci-v: 5.1 rev: 100
  Info: acl-mtu: 1021:4 sco-mtu: 96:6 link-policy: rswitch sniff link-mode: peripheral accept
    service-classes: rendering, capturing, audio, telephony
Drives:
  Local Storage: total: 447.13 GiB used: 212.56 GiB (47.5%)
  SMART Message: Unable to run smartctl. Root privileges required.
  ID-1: /dev/sda maj-min: 8:0 vendor: V-Gen model: 10SM19AR480SDK 480GB size: 447.13 GiB
    block-size: physical: 512 B logical: 512 B speed: 6.0 Gb/s type: SSD serial: <filter> rev: 2B0
    scheme: GPT
Partition:
  ID-1: / raw-size: 97.66 GiB size: 95.56 GiB (97.86%) used: 39 GiB (40.8%) fs: ext4 dev: /dev/sda4
    maj-min: 8:4
  ID-2: /boot/efi raw-size: 256 MiB size: 252 MiB (98.46%) used: 411 KiB (0.2%) fs: vfat
    dev: /dev/sda1 maj-min: 8:1
  ID-3: /home raw-size: 343.72 GiB size: 337.26 GiB (98.12%) used: 173.55 GiB (51.5%) fs: ext4
    dev: /dev/sda2 maj-min: 8:2
Swap:
  Kernel: swappiness: 15 (default 60) cache-pressure: 100 (default)
  ID-1: swap-1 type: partition size: 5.5 GiB used: 12.2 MiB (0.2%) priority: -2 dev: /dev/sda3
    maj-min: 8:3
Sensors:
  System Temperatures: cpu: 42.0 C mobo: N/A
  Fan Speeds (RPM): cpu: 0
Repos:
  Packages: pm: dpkg pkgs: 2619 libs: 1413 tools: apt,apt-get,aptitude,nala,synaptic pm: rpm
    pkgs: 0 pm: flatpak pkgs: 0
  No active apt repos in: /etc/apt/sources.list
  Active apt repos in: /etc/apt/sources.list.d/debian-stable-updates.list
    1: deb http://deb.debian.org/debian bookworm-updates main contrib non-free non-free-firmware
  Active apt repos in: /etc/apt/sources.list.d/debian.list
    1: deb http://deb.debian.org/debian bookworm main contrib non-free non-free-firmware
    2: deb http://security.debian.org/debian-security bookworm-security main contrib non-free non-free-firmware
  Active apt repos in: /etc/apt/sources.list.d/google-chrome.list
    1: deb [arch=amd64] https://dl.google.com/linux/chrome/deb/ stable main
  Active apt repos in: /etc/apt/sources.list.d/google-earth-pro.list
    1: deb [arch=amd64] http://dl.google.com/linux/earth/deb/ stable main
  Active apt repos in: /etc/apt/sources.list.d/microsoft-edge.list
    1: deb [arch=amd64] https://packages.microsoft.com/repos/edge/ stable main
  Active apt repos in: /etc/apt/sources.list.d/mx.list
    1: deb https://mirrors.aliyun.com/mxlinux/mx/repo/ bookworm main non-free
  Active apt repos in: /etc/apt/sources.list.d/teamviewer.list
    1: deb [signed-by=/usr/share/keyrings/teamviewer-keyring.gpg] https://linux.teamviewer.com/deb stable main
  Active apt repos in: /etc/apt/sources.list.d/zotero.list
    1: deb [signed-by=/usr/share/keyrings/zotero-archive-keyring.gpg by-hash=force] https://zotero.retorque.re/file/apt-package-archive ./
Info:
  Processes: 212 Uptime: 30m wakeups: 2 Memory: 3.65 GiB used: 3.06 GiB (83.8%) Init: SysVinit
  v: 3.06 runlevel: 5 default: graphical tool: systemctl Compilers: gcc: 12.2.0 alt: 12
  Client: shell wrapper v: 5.2.15-release inxi: 3.3.26
Boot Mode: UEFI

User avatar
fehlix
Developer
Posts: 12992
Joined: Wed Apr 11, 2018 5:09 pm

Re: Install Mendeley Reference Manager was not successfull  [Solved]

#7 Post by fehlix »

mega wrote: Sat Feb 03, 2024 5:45 am Hello,
I try to install mendeley reference manager. I try follow the instruction in
The command like this :

Code: Select all

# ./mendeley-reference-manager-2.109.0-x86_64.AppImage
You may consider to run (not install) the executable Appimage as normal user not as root.

mega
Posts: 56
Joined: Wed May 01, 2019 12:11 am

Re: Install Mendeley Reference Manager was not successfull

#8 Post by mega »

Hello fehlix,
Thank you for your suggestion. Now, it runs well.

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